Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | DCX48_22820 | O69754 | Positive | 4908246 - 4909091 | 30623.1 |
| pyridoxal 5'-phosphate synthase | DCX48_22825 | Q396C5 | Positive | 4909101 - 4909739 | 24196.7 |
| phenazine antibiotic biosynthesis protein | DCX48_22830 | Not Available | Positive | 4909752 - 4910813 | 39504.3 |
| aldehyde dehydrogenase family protein | DCX48_22835 | A5YBJ3 | Positive | 4910813 - 4912222 | 51101.4 |
| acyltransferase domain-containing protein | DCX48_22840 | Q03132 | Positive | 4912219 - 4913136 | 33188.1 |
| amino acid adenylation domain-containing protein | DCX48_22845 | P45745 | Positive | 4913166 - 4914950 | 64405.2 |
| hypothetical protein | DCX48_22850 | B1JLV4 | Positive | 4915016 - 4915471 | 17437.2 |
| nad/fad-binding protein | DCX48_22855 | Q2UG11 | Positive | 4915369 - 4916886 | 56954.5 |
| pqq-dependent sugar dehydrogenase | DCX48_22860 | P75804 | Positive | 4917050 - 4918216 | 42815.8 |
| glutathione s-transferase | DCX48_22865 | P0ACA8 | Negative | 4918249 - 4918866 | 23291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
