Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf418 family protein | DCX48_22770 | P25747 | Positive | 4898736 - 4899911 | 44098.0 |
| outer membrane permeability protein sana | DCX48_22775 | P0AFY4 | Negative | 4899921 - 4900703 | 29517.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DCX48_22780 | Q6D3N6 | Negative | 4900886 - 4902214 | 49469.5 |
| duf2461 family protein | DCX48_22785 | Not Available | Negative | 4902575 - 4902877 | 11703.1 |
| phenazine biosynthesis protein | DCX48_22790 | Q8GPH6 | Positive | 4903518 - 4903904 | 14120.7 |
| sdr family oxidoreductase | DCX48_22795 | A6SSW9 | Positive | 4904062 - 4904841 | 28526.0 |
| phenazine biosynthesis protein | DCX48_22800 | O69753 | Positive | 4904888 - 4905346 | 17993.4 |
| isochorismatase family protein | DCX48_22805 | Q51518 | Positive | 4905426 - 4906046 | 23151.9 |
| phenazine antibiotic biosynthesis protein | DCX48_22810 | Q51791 | Positive | 4906043 - 4907920 | 69581.1 |
| hypothetical protein | DCX48_22815 | Not Available | Positive | 4907917 - 4908267 | 13460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
