Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DCX48_22720 | P36948 | Negative | 4886923 - 4887918 | 34819.8 |
| sugar abc transporter atp-binding protein | DCX48_22725 | Q8UBN2 | Negative | 4887915 - 4889426 | 55210.6 |
| oxidoreductase | DCX48_22730 | P45579 | Positive | 4889679 - 4890767 | 38599.7 |
| ktsc domain-containing protein | DCX48_22735 | A4VNI2 | Negative | 4890829 - 4891041 | 8251.83 |
| glutathione s-transferase | DCX48_22740 | Q9P6M1 | Negative | 4891402 - 4892046 | 24508.7 |
| s-formylglutathione hydrolase | DCX48_22745 | A1AD14 | Negative | 4892212 - 4893072 | 32230.8 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DCX48_22750 | A7ZIA4 | Negative | 4893112 - 4894227 | 39212.4 |
| lysr family transcriptional regulator | DCX48_22755 | P77309 | Negative | 4894346 - 4895218 | 31793.2 |
| methyl-accepting chemotaxis protein | DCX48_22760 | P21823 | Positive | 4895922 - 4897604 | 60090.5 |
| gtp cyclohydrolase i fole | DCX48_22765 | Q6D3N3 | Positive | 4897936 - 4898598 | 24571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
