Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DCX48_02340 | P0AFR5 | Positive | 375283 - 375903 | 22952.7 |
| 23s rrna pseudouridine(2605) synthase rlub | DCX48_02345 | Q8ZEG0 | Positive | 376064 - 376948 | 33340.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DCX48_02350 | P31570 | Negative | 377032 - 377622 | 21902.1 |
| ycik family oxidoreductase | DCX48_02355 | P31808 | Negative | 377641 - 378402 | 27702.5 |
| protease sohb | DCX48_02360 | P0AG14 | Positive | 378758 - 379804 | 38745.0 |
| duf2498 family protein | DCX48_02365 | P0AB63 | Negative | 379863 - 380132 | 10268.2 |
| type i dna topoisomerase | DCX48_02370 | P06612 | Positive | 380459 - 383059 | 97272.7 |
| hth-type transcriptional regulator cysb | DCX48_02375 | P45600 | Positive | 383774 - 384748 | 35970.2 |
| hypothetical protein | DCX48_02380 | Not Available | Positive | 384794 - 384988 | 7522.37 |
| dipeptide/tripeptide permease dtpa | DCX48_02385 | C6DH09 | Negative | 384966 - 386483 | 54943.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
