Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_22420 | Not Available | Positive | 4826890 - 4827564 | 24588.1 |
| hypothetical protein | DCX48_22425 | Not Available | Positive | 4827554 - 4827883 | 12877.6 |
| hypothetical protein | DCX48_22430 | Not Available | Positive | 4827876 - 4828187 | 11835.5 |
| hypothetical protein | DCX48_22435 | Not Available | Positive | 4828449 - 4828916 | 17293.5 |
| hypothetical protein | DCX48_22440 | Not Available | Positive | 4828913 - 4829110 | 7016.44 |
| hypothetical protein | DCX48_22445 | Q6QIB0 | Positive | 4829100 - 4829312 | 7500.25 |
| dna-binding protein ybib | DCX48_22450 | P30177 | Positive | 4829322 - 4830290 | 35134.5 |
| peptidase m3 | DCX48_22455 | Not Available | Positive | 4830377 - 4832245 | 70767.0 |
| glutamine abc transporter atp-binding protein glnq | DCX48_22460 | P10346 | Negative | 4832285 - 4833007 | 26555.3 |
| glutamine abc transporter permease glnp | DCX48_22465 | P0AEQ8 | Negative | 4833004 - 4833663 | 24053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
