Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid kinase | DCX48_22120 | A7X424 | Positive | 4761673 - 4762596 | 33123.6 |
| nitroreductase family protein | DCX48_22125 | Q96VH4 | Negative | 4762661 - 4763260 | 22212.3 |
| molybdopterin-synthase adenylyltransferase moeb | DCX48_22130 | P12282 | Negative | 4763367 - 4764119 | 27395.3 |
| molybdopterin molybdotransferase | DCX48_22135 | P12281 | Negative | 4764122 - 4765357 | 44247.9 |
| dipeptide abc transporter atp-binding protein | DCX48_22140 | Q6D3A9 | Positive | 4765834 - 4767735 | 70511.0 |
| glutathione abc transporter substrate-binding protein gsib | DCX48_22145 | Q6D3B0 | Positive | 4767770 - 4769305 | 56409.7 |
| glutathione abc transporter permease gsic | DCX48_22150 | Q6D3B1 | Positive | 4769415 - 4770335 | 34033.9 |
| glutathione abc transporter permease gsid | DCX48_22155 | Q6D3B2 | Positive | 4770345 - 4771250 | 33270.5 |
| nad-dependent malic enzyme | DCX48_22160 | Q6D3B3 | Negative | 4771307 - 4773004 | 62724.0 |
| cytidine deaminase | DCX48_22165 | Q6D3B4 | Negative | 4773214 - 4774104 | 31973.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
