Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | DCX48_22020 | Not Available | Negative | 4741834 - 4742436 | 23888.6 |
| hypothetical protein | DCX48_22025 | Not Available | Positive | 4742987 - 4743913 | 36998.6 |
| gtp-binding protein hsr1 | DCX48_22030 | P75678 | Positive | 4744008 - 4744895 | 33376.2 |
| hypothetical protein | DCX48_22035 | Not Available | Positive | 4745384 - 4746217 | 31021.5 |
| hypothetical protein | DCX48_22040 | Not Available | Positive | 4746275 - 4746625 | 12903.5 |
| dna repair protein radc | DCX48_22045 | P52140 | Positive | 4746748 - 4747221 | 17524.3 |
| type iv toxin-antitoxin system yeeu family antitoxin | DCX48_22050 | P52141 | Positive | 4747261 - 4747596 | 12469.0 |
| toxin | DCX48_22055 | P77692 | Positive | 4747665 - 4747985 | 12023.4 |
| duf4942 domain-containing protein | DCX48_22060 | Not Available | Positive | 4748103 - 4748936 | 32150.4 |
| hypothetical protein | DCX48_22065 | Q7CPV2 | Positive | 4749068 - 4749265 | 7141.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
