Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DCX48_21470 | P52686 | Negative | 4638887 - 4639825 | 35316.6 |
| cdp-diacylglycerol diphosphatase | DCX48_21475 | Q5PIR4 | Negative | 4639973 - 4640731 | 28113.6 |
| luxr family transcriptional regulator | DCX48_21480 | Q46967 | Negative | 4641223 - 4641960 | 28318.3 |
| tetr/acrr family transcriptional regulator | DCX48_21485 | Q6NH62 | Positive | 4642512 - 4643126 | 22602.3 |
| membrane integrity-associated transporter subunit pqic | DCX48_21490 | Not Available | Negative | 4643104 - 4643727 | 22582.1 |
| mce family protein | DCX48_21495 | P43671 | Negative | 4643724 - 4645370 | 59943.9 |
| paraquat-inducible protein a | DCX48_21500 | P0AFM0 | Negative | 4645367 - 4645990 | 22912.6 |
| paraquat-inducible protein a | DCX48_21505 | P0AD04 | Negative | 4645980 - 4646618 | 23432.4 |
| duf3313 domain-containing protein | DCX48_21510 | Not Available | Negative | 4646654 - 4647316 | 23783.2 |
| chemotaxis signal transduction protein chev | DCX48_21515 | O25154 | Positive | 4647861 - 4648832 | 35636.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
