Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | DCX48_21270 | O31820 | Positive | 4586825 - 4587322 | 17864.3 |
| dmt family transporter | DCX48_21275 | P39314 | Negative | 4587373 - 4588344 | 35795.8 |
| arac family transcriptional regulator | DCX48_21280 | O31449 | Negative | 4588464 - 4589297 | 31737.1 |
| hth-type transcriptional regulator cbl | DCX48_21285 | Q08598 | Positive | 4589853 - 4590806 | 35791.0 |
| glutamate/aspartate:proton symporter gltp | DCX48_21290 | P21345 | Positive | 4591230 - 4592546 | 47218.3 |
| hypothetical protein | DCX48_21295 | Not Available | Positive | 4592717 - 4593613 | 33303.1 |
| iron-containing alcohol dehydrogenase family protein | DCX48_21300 | P0A9S6 | Negative | 4594237 - 4595340 | 39700.5 |
| abc transporter permease | DCX48_21305 | Q57856 | Negative | 4595458 - 4596324 | 31795.6 |
| abc transporter atp-binding protein | DCX48_21310 | Q2K164 | Negative | 4596284 - 4597150 | 31994.5 |
| sulfonate abc transporter substrate-binding protein | DCX48_21315 | Not Available | Negative | 4597208 - 4598230 | 37266.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
