Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DCX48_21220 | Not Available | Negative | 4571508 - 4572401 | 34277.4 |
| citrate transporter | DCX48_21225 | P42308 | Negative | 4572511 - 4573824 | 47035.4 |
| formate dehydrogenase subunit alpha | DCX48_21230 | P07658 | Negative | 4574614 - 4576764 | 79072.5 |
| methyl-accepting chemotaxis protein | DCX48_21235 | Q02755 | Positive | 4577302 - 4578981 | 60889.2 |
| ftr1 family iron permease | DCX48_21240 | P39595 | Positive | 4579527 - 4581431 | 70323.3 |
| iron transporter | DCX48_21245 | Q8FWR4 | Positive | 4581548 - 4582075 | 18925.7 |
| duf2318 domain-containing protein | DCX48_21250 | Not Available | Positive | 4582299 - 4583696 | 50850.5 |
| abc transporter permease | DCX48_21255 | Q58902 | Positive | 4583699 - 4584988 | 46390.9 |
| abc transporter permease | DCX48_21260 | Q58902 | Positive | 4584996 - 4586117 | 40313.9 |
| abc transporter atp-binding protein | DCX48_21265 | Q58903 | Positive | 4586122 - 4586838 | 26550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
