Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbf family lipoprotein | DCX48_20920 | P32687 | Positive | 4461054 - 4461713 | 24482.3 |
| hypothetical protein | DCX48_20925 | P32688 | Positive | 4461723 - 4462505 | 28812.5 |
| yjbh domain-containing protein | DCX48_20930 | P32689 | Positive | 4462502 - 4464619 | 78681.5 |
| chorismate mutase | DCX48_20935 | P42517 | Positive | 4465010 - 4465567 | 20760.0 |
| peptidase s53 | DCX48_20940 | Q4WGU1 | Positive | 4465587 - 4467206 | 58512.2 |
| glycoside hydrolase family 1 protein | DCX48_20945 | P42403 | Positive | 4467500 - 4468924 | 54015.3 |
| prd domain-containing protein | DCX48_20950 | P39805 | Positive | 4469020 - 4469850 | 31120.8 |
| diguanylate cyclase adra | DCX48_20955 | P0AAP2 | Positive | 4470076 - 4471137 | 39497.0 |
| antibiotic biosynthesis monooxygenase | DCX48_20960 | P73602 | Negative | 4471209 - 4471496 | 11230.7 |
| murr/rpir family transcriptional regulator | DCX48_20965 | Q8RD36 | Negative | 4471544 - 4472401 | 31650.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
