Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DCX48_20870 | P26402 | Positive | 4450154 - 4451284 | 42965.7 |
| glycosyltransferase | DCX48_20875 | P26403 | Positive | 4451403 - 4452320 | 34501.2 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DCX48_20880 | Q8X7P1 | Positive | 4452339 - 4453748 | 51669.3 |
| phosphomannomutase | DCX48_20885 | P37755 | Positive | 4453761 - 4455131 | 50365.1 |
| dtdp-4-dehydrorhamnose reductase | DCX48_20890 | O66251 | Negative | 4455207 - 4456058 | 31247.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DCX48_20895 | P26394 | Negative | 4456055 - 4456591 | 20345.1 |
| glucose-1-phosphate thymidylyltransferase | DCX48_20900 | P55257 | Negative | 4456593 - 4457462 | 32360.2 |
| galu regulator galf | DCX48_20905 | Q48447 | Positive | 4457709 - 4458605 | 32440.3 |
| nadp-dependent phosphogluconate dehydrogenase | DCX48_20910 | P14062 | Positive | 4458836 - 4460242 | 51614.2 |
| integrase | DCX48_20915 | Not Available | Negative | 4460768 - 4460833 | 1792.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
