Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | DCX48_20820 | P08142 | Positive | 4439111 - 4440907 | 65085.3 |
| nad(p)-dependent oxidoreductase | DCX48_20825 | Not Available | Positive | 4440913 - 4441848 | 35361.2 |
| acetaldehyde dehydrogenase (acetylating) | DCX48_20830 | Q6D797 | Positive | 4441876 - 4442766 | 31955.6 |
| 4-hydroxy-2-oxovalerate aldolase | DCX48_20835 | Q6D796 | Positive | 4442771 - 4443802 | 36892.3 |
| sdr family oxidoreductase | DCX48_20840 | Q9FIE8 | Positive | 4443805 - 4444860 | 38685.9 |
| mate family efflux transporter | DCX48_20845 | Q05347 | Positive | 4445098 - 4446417 | 49246.8 |
| glycosyltransferase family 2 protein | DCX48_20850 | Q57022 | Positive | 4446380 - 4447159 | 29160.6 |
| acyltransferase | DCX48_20855 | P07464 | Positive | 4447213 - 4447782 | 20358.5 |
| glycosyltransferase | DCX48_20860 | P27127 | Positive | 4447798 - 4448943 | 43401.6 |
| hypothetical protein | DCX48_20865 | P0A236 | Positive | 4449369 - 4450142 | 29862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
