Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit b | DCX48_20370 | A7FFQ9 | Negative | 4339592 - 4341736 | 75808.1 |
| potassium-transporting atpase subunit kdpa | DCX48_20375 | Q6D7I3 | Negative | 4341752 - 4343440 | 59292.8 |
| k(+)-transporting atpase subunit f | DCX48_20380 | Not Available | Negative | 4343440 - 4343529 | 3180.19 |
| duf2517 family protein | DCX48_20385 | P0AAU3 | Positive | 4343940 - 4344146 | 8020.96 |
| iron abc transporter permease | DCX48_20390 | Q44123 | Negative | 4344290 - 4345945 | 58523.4 |
| extracellular solute-binding protein | DCX48_20395 | P96062 | Negative | 4346146 - 4347126 | 35042.1 |
| abc transporter atp-binding protein | DCX48_20400 | A1TXH7 | Negative | 4347144 - 4347836 | 25034.5 |
| duf1722 domain-containing protein | DCX48_20405 | P24252 | Positive | 4348253 - 4349212 | 36706.5 |
| deoxyribodipyrimidine photo-lyase | DCX48_20410 | P00914 | Positive | 4349234 - 4350727 | 57295.9 |
| nif3-like dinuclear metal center hexameric protein | DCX48_20415 | Q8ZD91 | Positive | 4350720 - 4351463 | 27349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
