Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DCX48_19970 | P0AA27 | Negative | 4261006 - 4262271 | 47185.5 |
| metalloprotease tldd | DCX48_19975 | P0AGG9 | Negative | 4262338 - 4263783 | 51560.9 |
| peptidase u62 | DCX48_19980 | P0AFK1 | Negative | 4263818 - 4265182 | 48013.3 |
| biopolymer transporter exbd | DCX48_19985 | O06434 | Negative | 4265347 - 4265769 | 15376.7 |
| mota/tolq/exbb proton channel family protein | DCX48_19990 | B0RLE6 | Negative | 4265784 - 4266542 | 27678.4 |
| energy transducer tonb | DCX48_19995 | O52042 | Negative | 4266621 - 4267499 | 31290.6 |
| fecr family protein | DCX48_20000 | P23485 | Negative | 4267670 - 4268629 | 35487.5 |
| sigma-70 family rna polymerase sigma factor | DCX48_20005 | P23484 | Negative | 4268654 - 4269175 | 19764.8 |
| tonb-dependent siderophore receptor | DCX48_20010 | A0A0H2ZI93 | Positive | 4269585 - 4271960 | 85425.8 |
| abc transporter atp-binding protein/permease | DCX48_20015 | P45221 | Positive | 4272035 - 4273837 | 67275.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
