Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_01990 | Q6D4M3 | Positive | 302073 - 302330 | 9764.07 |
| fumarylacetoacetate hydrolase family protein | DCX48_01995 | P76004 | Positive | 302673 - 303329 | 23859.9 |
| ycgn family cysteine cluster protein | DCX48_02000 | Q6D4M5 | Positive | 303437 - 303883 | 17755.0 |
| hypothetical protein | DCX48_02005 | Not Available | Negative | 303969 - 304376 | 15682.8 |
| dna polymerase iii subunit theta | DCX48_02010 | Q8Z2E1 | Positive | 304740 - 304937 | 7933.34 |
| disulfide bond formation protein dsbb | DCX48_02015 | Q6D4M8 | Negative | 305018 - 305548 | 20125.0 |
| sodium/proton antiporter nhab | DCX48_02020 | Q6D4M9 | Negative | 305743 - 307323 | 58312.4 |
| fatty acid metabolism transcriptional regulator fadr | DCX48_02025 | Q6D4N0 | Positive | 307553 - 308272 | 27116.5 |
| spovr family protein | DCX48_02030 | P29013 | Negative | 308378 - 309919 | 60578.7 |
| tagatose-bisphosphate aldolase | DCX48_02035 | Q8Z2T5 | Negative | 310161 - 311060 | 32508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
