Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase mltc | DCX48_18570 | Q6D8K0 | Negative | 3926247 - 3927320 | 39775.3 |
| oxidative damage protection protein | DCX48_18575 | Q6D8J9 | Negative | 3927373 - 3927645 | 10640.8 |
| adenine dna glycosylase | DCX48_18580 | Q05869 | Negative | 3927642 - 3928748 | 41713.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DCX48_18585 | Q6D8J7 | Positive | 3928914 - 3929633 | 27336.2 |
| duf469 domain-containing protein | DCX48_18590 | P38521 | Positive | 3929635 - 3929979 | 13409.0 |
| duf2884 family protein | DCX48_18595 | P0ADT1 | Positive | 3930094 - 3930807 | 26518.8 |
| autotransporter domain-containing protein | DCX48_18600 | P09489 | Positive | 3931029 - 3934139 | 110609.0 |
| nadp(h)-dependent aldo-keto reductase | DCX48_18605 | P0A9T4 | Negative | 3934191 - 3935252 | 39273.6 |
| integrase | DCX48_18610 | Not Available | Positive | 3935266 - 3935536 | 9994.23 |
| ygdi/ygdr family lipoprotein | DCX48_18615 | P65296 | Negative | 3935459 - 3935665 | 7512.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
