Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | DCX48_16515 | Q6D9B6 | Positive | 3484237 - 3485574 | 47765.8 |
| hypothetical protein | DCX48_16520 | Not Available | Positive | 3485616 - 3485813 | 7237.0 |
| preprotein translocase subunit secg | DCX48_16525 | P0AGA1 | Positive | 3485825 - 3486157 | 11439.1 |
| Trna-leu | Not Available | Not Available | Positive | 3486182 - 3486268 | Not Available |
| integrase | DCX48_16535 | Not Available | Negative | 3486329 - 3486929 | 22625.6 |
| integrase | DCX48_16540 | Not Available | Negative | 3486977 - 3487246 | 9888.19 |
| integrase | DCX48_16545 | P27206 | Negative | 3487240 - 3487993 | 27891.4 |
| hypothetical protein | DCX48_16550 | Q70LM4 | Negative | 3487990 - 3488406 | 16016.3 |
| integrase | DCX48_16555 | Q9T1T5 | Negative | 3488330 - 3488785 | 17191.5 |
| integrase | DCX48_16560 | Not Available | Negative | 3488790 - 3489234 | 16451.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
