Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | DCX48_16465 | Q6D9C6 | Positive | 3474763 - 3475074 | 11551.1 |
| 50s ribosomal protein l27 | DCX48_16470 | Q6D9C5 | Positive | 3475094 - 3475351 | 9124.0 |
| dmt family transporter | DCX48_16475 | P0AA74 | Positive | 3475441 - 3476403 | 35172.6 |
| gtpase obge | DCX48_16480 | Q6D9C3 | Positive | 3476664 - 3477836 | 43049.0 |
| serine-type d-ala-d-ala carboxypeptidase | DCX48_16485 | P24228 | Negative | 3477907 - 3479340 | 52015.4 |
| transcription elongation factor grea | DCX48_16490 | P64282 | Positive | 3479609 - 3480088 | 17859.2 |
| ribosome assembly rna-binding protein yhby | DCX48_16495 | P0AGK6 | Negative | 3480216 - 3480509 | 10713.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | DCX48_16500 | Q6D9B9 | Positive | 3480654 - 3481283 | 23274.5 |
| atp-dependent zinc metalloprotease ftsh | DCX48_16505 | P0AAI3 | Positive | 3481340 - 3483277 | 70926.5 |
| dihydropteroate synthase | DCX48_16510 | P0AC14 | Positive | 3483396 - 3484229 | 30029.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
