Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | DCX48_01740 | Q6D4H4 | Positive | 251421 - 251717 | 11239.5 |
| nitrous oxide-stimulated promoter family protein | DCX48_01745 | P25728 | Negative | 251759 - 252193 | 16561.0 |
| abc transporter atp-binding protein | DCX48_01750 | P45861 | Negative | 252331 - 254049 | 63395.3 |
| drug/metabolite dmt transporter permease | DCX48_01755 | D0ZXP9 | Negative | 254164 - 255051 | 32289.9 |
| ammonia-dependent nad(+) synthetase | DCX48_01760 | Q6D4H8 | Negative | 255195 - 256019 | 30203.7 |
| osmotically-inducible lipoprotein osme | DCX48_01765 | P0ADB2 | Positive | 256245 - 256574 | 11887.2 |
| l-cystine transporter | DCX48_01770 | P77529 | Negative | 256685 - 258079 | 48857.1 |
| metal-dependent hydrolase | DCX48_01775 | P64481 | Negative | 258256 - 258831 | 21582.6 |
| alpha/beta hydrolase | DCX48_01780 | D5EV35 | Negative | 258940 - 259902 | 34582.6 |
| porin | DCX48_01785 | Q934G3 | Negative | 260242 - 260958 | 27358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
