Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 1,5-bisphosphokinase | DCX48_16065 | Q6D9W6 | Positive | 3394540 - 3395106 | 21489.8 |
| phosphonate metabolism protein phnp | DCX48_16070 | P16692 | Positive | 3395160 - 3395933 | 28848.8 |
| undecaprenyl-phosphate glucose phosphotransferase | DCX48_16075 | Q48460 | Positive | 3396435 - 3397841 | 53364.7 |
| capsular biosynthesis protein | DCX48_16080 | Not Available | Positive | 3397831 - 3399117 | 49689.2 |
| polysaccharide export protein | DCX48_16085 | Q8ZNQ9 | Positive | 3399119 - 3399676 | 20588.9 |
| capsular biosynthesis protein | DCX48_16090 | P33698 | Positive | 3399679 - 3401811 | 78941.0 |
| capsular biosynthesis protein | DCX48_16095 | Not Available | Positive | 3401825 - 3403036 | 45813.6 |
| capsular biosynthesis protein | DCX48_16100 | Not Available | Positive | 3403033 - 3404415 | 51138.2 |
| glycosyltransferase | DCX48_16105 | P9WLV4 | Positive | 3404408 - 3405397 | 36897.9 |
| glycosyltransferase family 1 protein | DCX48_16110 | A0R2E2 | Positive | 3405407 - 3406618 | 45334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
