Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate mutase | DCX48_16015 | P96074 | Positive | 3385636 - 3386568 | 34624.6 |
| phosphonopyruvate decarboxylase | DCX48_16020 | O86938 | Positive | 3386748 - 3387902 | 41188.5 |
| nad(p)-dependent oxidoreductase | DCX48_16025 | P77161 | Positive | 3387955 - 3388848 | 32898.2 |
| phosphonate c-p lyase system protein phng | DCX48_16030 | P16685 | Positive | 3388849 - 3389292 | 16992.3 |
| phosphonate c-p lyase system protein phnh | DCX48_16035 | P16686 | Positive | 3389299 - 3389880 | 20987.7 |
| carbon-phosphorus lyase complex subunit phni | DCX48_16040 | P16687 | Positive | 3389880 - 3390983 | 40886.2 |
| carbon-phosphorus lyase | DCX48_16045 | P16688 | Positive | 3390983 - 3391888 | 34227.5 |
| phosphonate c-p lyase system protein phnk | DCX48_16050 | P16678 | Positive | 3391885 - 3392673 | 29229.4 |
| phosphonate c-p lyase system protein phnl | DCX48_16055 | P16679 | Positive | 3392695 - 3393411 | 26927.2 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DCX48_16060 | P16689 | Positive | 3393401 - 3394537 | 42211.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
