Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator kdgr | DCX48_01690 | P37728 | Positive | 241498 - 242289 | 29784.7 |
| hypothetical protein | DCX48_01695 | Q8ZFG9 | Positive | 242519 - 242782 | 10052.4 |
| amino acid permease | DCX48_01700 | P15993 | Positive | 242896 - 244272 | 50070.8 |
| threonine--trna ligase | DCX48_01705 | Q6D4G8 | Positive | 244552 - 246480 | 73659.9 |
| translation initiation factor if-3 | DCX48_01710 | Q6D4G9 | Positive | 246483 - 247025 | 20542.1 |
| 50s ribosomal protein l35 | DCX48_01715 | Q6D4H0 | Positive | 247121 - 247318 | 7253.31 |
| 50s ribosomal protein l20 | DCX48_01720 | Q6D4H1 | Positive | 247362 - 247718 | 13483.7 |
| phest operon leader peptide phem | DCX48_01725 | Not Available | Positive | 247823 - 247867 | 1732.1 |
| phenylalanine--trna ligase subunit alpha | DCX48_01730 | Q6D4H2 | Positive | 248031 - 249014 | 37143.3 |
| phenylalanine--trna ligase subunit beta | DCX48_01735 | Q6D4H3 | Positive | 249029 - 251416 | 86884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
