Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | DCX48_15915 | P0AGB1 | Negative | 3352766 - 3353743 | 35096.5 |
| ytjb family periplasmic protein | DCX48_15920 | Q8ZIQ1 | Positive | 3353900 - 3354595 | 25824.2 |
| hypothetical protein | DCX48_15925 | Not Available | Negative | 3354649 - 3355554 | 33569.9 |
| peptide chain release factor 3 | DCX48_15930 | Q6D9Z5 | Positive | 3355845 - 3357434 | 59687.6 |
| molecular chaperone osmy | DCX48_15935 | P0AFH9 | Positive | 3357937 - 3358545 | 20945.9 |
| duf1328 domain-containing protein | DCX48_15940 | Q6D9Z3 | Positive | 3358697 - 3358858 | 5506.17 |
| stress-response protein | DCX48_15945 | Q7VXL5 | Positive | 3359007 - 3359195 | 7079.12 |
| metal-dependent hydrolase | DCX48_15950 | P39408 | Positive | 3359315 - 3360112 | 30157.4 |
| nupc/nupg family nucleoside cnt transporter | DCX48_15955 | P44742 | Positive | 3360407 - 3361684 | 44582.7 |
| 4'-phosphopantetheinyl transferase superfamily protein | DCX48_15960 | Q8Z8L9 | Positive | 3361834 - 3362550 | 27080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
