Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | DCX48_15515 | Not Available | Negative | 3259312 - 3260049 | 27057.2 |
| transglutaminase family protein | DCX48_15520 | Q49757 | Negative | 3260073 - 3260894 | 31062.6 |
| alpha-e domain-containing protein | DCX48_15525 | P9WL96 | Negative | 3260891 - 3261820 | 35825.0 |
| circularly permuted type 2 atp-grasp protein | DCX48_15530 | Q55587 | Negative | 3261814 - 3263253 | 54424.2 |
| 2-iminobutanoate/2-iminopropanoate deaminase | DCX48_15535 | Q7CP78 | Negative | 3263475 - 3263861 | 13774.6 |
| aspartate carbamoyltransferase regulatory subunit | DCX48_15540 | Q6DA74 | Negative | 3263960 - 3264424 | 17267.8 |
| aspartate carbamoyltransferase | DCX48_15545 | Q6DA73 | Negative | 3264440 - 3265375 | 34576.6 |
| yhch/yjgk/yial family protein | DCX48_15550 | P0AF96 | Positive | 3265824 - 3266291 | 17138.7 |
| ornithine carbamoyltransferase | DCX48_15555 | Q6DA71 | Negative | 3266338 - 3267345 | 36918.3 |
| ribonuclease e inhibitor rrab | DCX48_15560 | P0A1U7 | Positive | 3267507 - 3267932 | 16116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
