Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease degq | DCX48_15165 | P39099 | Negative | 3181504 - 3182874 | 47856.7 |
| duf1043 family protein | DCX48_15170 | P0ADW5 | Negative | 3183112 - 3183516 | 15324.2 |
| cell division protein zape | DCX48_15175 | P64613 | Positive | 3183733 - 3184884 | 44063.9 |
| 50s ribosomal protein l13 | DCX48_15180 | Q6DAE7 | Positive | 3185119 - 3185547 | 16033.5 |
| 30s ribosomal protein s9 | DCX48_15185 | Q6DAE6 | Positive | 3185563 - 3185955 | 14748.0 |
| stringent starvation protein a | DCX48_15190 | P0ACA5 | Positive | 3186285 - 3186926 | 24414.6 |
| clpxp protease specificity-enhancing factor | DCX48_15195 | P0AFZ4 | Positive | 3186932 - 3187435 | 17973.2 |
| (s)-acetoin forming diacetyl reductase | DCX48_15200 | Q48436 | Negative | 3187499 - 3188272 | 27033.2 |
| glutamate synthase small subunit | DCX48_15205 | P09832 | Negative | 3188535 - 3189953 | 51869.2 |
| glutamate synthase large subunit | DCX48_15210 | P09831 | Negative | 3189963 - 3194423 | 163682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
