Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | DCX48_15015 | P0AGG9 | Positive | 3154862 - 3156307 | 51222.0 |
| hypothetical protein | DCX48_15020 | Not Available | Negative | 3156411 - 3157004 | 21669.5 |
| integrase | DCX48_15025 | Not Available | Negative | 3157014 - 3157352 | 12595.2 |
| hth-type transcriptional activator aaer | DCX48_15030 | P67664 | Negative | 3157461 - 3158396 | 34920.2 |
| duf1656 domain-containing protein | DCX48_15035 | Q6DAH6 | Positive | 3159017 - 3159220 | 7760.88 |
| p-hydroxybenzoic acid efflux pump subunit aaea | DCX48_15040 | Q6DAH5 | Positive | 3159228 - 3160193 | 35625.8 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | DCX48_15045 | Q6DAH4 | Positive | 3160205 - 3162193 | 73121.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | DCX48_15050 | P0DOV9 | Positive | 3162333 - 3163787 | 52053.3 |
| ribosome-associated protein | DCX48_15055 | Q6DAH2 | Negative | 3163886 - 3164437 | 21182.2 |
| metalloprotease pmba | DCX48_15060 | P0AFK1 | Positive | 3164734 - 3166074 | 47931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
