Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | DCX48_14915 | Q6DAJ8 | Negative | 3132551 - 3132847 | 11169.6 |
| trna dihydrouridine synthase dusb | DCX48_14920 | O52539 | Negative | 3132871 - 3133836 | 35572.0 |
| carbonic anhydrase | DCX48_14925 | Q6DAJ6 | Negative | 3134194 - 3134928 | 26665.3 |
| 50s ribosomal protein l11 methyltransferase | DCX48_14930 | Q6DAJ5 | Negative | 3135106 - 3135993 | 32140.2 |
| sodium/pantothenate symporter | DCX48_14935 | P16256 | Negative | 3136011 - 3137462 | 51763.6 |
| duf997 family protein | DCX48_14940 | P45566 | Negative | 3137452 - 3137694 | 9198.29 |
| hypothetical protein | DCX48_14945 | Not Available | Positive | 3137693 - 3137893 | 7432.27 |
| acetyl-coa carboxylase biotin carboxylase subunit | DCX48_14950 | P24182 | Negative | 3137863 - 3139206 | 49322.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DCX48_14955 | P0ABE0 | Negative | 3139218 - 3139685 | 16617.3 |
| type ii 3-dehydroquinate dehydratase | DCX48_14960 | Q6DAJ1 | Negative | 3139710 - 3140162 | 16409.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
