Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1481 domain-containing protein | DCX48_14815 | P32681 | Positive | 3114070 - 3114756 | 25786.9 |
| phosphoribosylamine--glycine ligase | DCX48_14820 | Q8ZAR2 | Negative | 3114825 - 3116111 | 45348.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DCX48_14825 | Q6DAL2 | Negative | 3116129 - 3117718 | 57545.3 |
| Trna-ile | Not Available | Not Available | Positive | 3118857 - 3118933 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3118976 - 3119051 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3120094 - 3120209 | Not Available |
| amino acid abc transporter atp-binding protein | DCX48_14845 | P45769 | Negative | 3120393 - 3121154 | 28672.8 |
| amino acid abc transporter permease | DCX48_14850 | P45768 | Negative | 3121163 - 3122257 | 41051.1 |
| amino acid abc transporter permease | DCX48_14855 | P45767 | Negative | 3122267 - 3123445 | 43433.9 |
| amino acid abc transporter substrate-binding protein | DCX48_14860 | P58068 | Negative | 3123501 - 3124526 | 37017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
