Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DCX48_14665 | Not Available | Negative | 3084694 - 3085002 | 11149.9 |
| Trna-thr | Not Available | Not Available | Positive | 3085332 - 3085407 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3085423 - 3085507 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3085637 - 3085711 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3085718 - 3085793 | Not Available |
| elongation factor tu | DCX48_14690 | Q6CZW6 | Positive | 3085901 - 3087085 | 43277.2 |
| elongation factor tu | DCX48_14695 | Not Available | Positive | 3087089 - 3087190 | 3866.64 |
| preprotein translocase subunit sece | DCX48_14700 | P0A2D4 | Positive | 3087323 - 3087706 | 13754.2 |
| transcription termination/antitermination protein nusg | DCX48_14705 | P0AA01 | Positive | 3087708 - 3088253 | 20558.7 |
| 50s ribosomal protein l11 | DCX48_14710 | Q6DAN4 | Positive | 3088416 - 3088844 | 14768.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
