Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tata | DCX48_14565 | Q7MZ84 | Positive | 3065062 - 3065322 | 9161.88 |
| sec-independent protein translocase subunit tatb | DCX48_14570 | Q6DAQ3 | Positive | 3065326 - 3065919 | 21356.8 |
| sec-independent protein translocase subunit tatc | DCX48_14575 | P69424 | Positive | 3065923 - 3066678 | 27960.1 |
| 3'-5' ssdna/rna exonuclease tatd | DCX48_14580 | Q6DAQ1 | Positive | 3066758 - 3067540 | 28885.5 |
| porphobilinogen synthase | DCX48_14585 | Q59643 | Positive | 3067558 - 3068580 | 37883.5 |
| transcription/translation regulatory transformer protein rfah | DCX48_14590 | P0AFW1 | Negative | 3068642 - 3069130 | 18440.4 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | DCX48_14595 | Q6DAP8 | Positive | 3069331 - 3070827 | 56513.0 |
| nad(p)h-flavin reductase | DCX48_14600 | Q9L6L9 | Positive | 3070877 - 3071578 | 26152.4 |
| acetyl-coa c-acyltransferase fada | DCX48_14605 | Q6DAP6 | Negative | 3071672 - 3072835 | 41017.6 |
| fatty acid oxidation complex subunit alpha fadb | DCX48_14610 | Q6DAP5 | Negative | 3072847 - 3075036 | 79242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
