Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactonate dehydratase family protein | DCX48_14515 | Q6DAR4 | Positive | 3053441 - 3054640 | 45211.1 |
| gntr family transcriptional regulator | DCX48_14520 | O05509 | Negative | 3054646 - 3055359 | 27009.6 |
| acetylornithine deacetylase | DCX48_14525 | Q6DAR2 | Negative | 3055414 - 3056565 | 42271.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DCX48_14530 | Q6DAR1 | Positive | 3056768 - 3057772 | 36173.5 |
| acetylglutamate kinase | DCX48_14535 | Q6DAR0 | Positive | 3057810 - 3058583 | 26743.7 |
| argininosuccinate lyase | DCX48_14540 | Q6DAQ9 | Positive | 3058645 - 3060018 | 50504.5 |
| dna recombination protein rmuc | DCX48_14545 | Q8ZAL8 | Positive | 3060253 - 3061782 | 57638.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DCX48_14550 | Q6DAQ7 | Positive | 3061951 - 3062706 | 28084.9 |
| scp2 domain-containing protein | DCX48_14555 | Q9L6M5 | Positive | 3062719 - 3063342 | 23707.7 |
| ubiquinone biosynthesis regulatory protein kinase ubib | DCX48_14560 | Q6DAQ5 | Positive | 3063339 - 3064979 | 63050.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
