Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DCX48_14465 | P0A1U3 | Positive | 3036918 - 3037817 | 33912.9 |
| hth-type transcriptional regulator metr | DCX48_14470 | P0A9G0 | Negative | 3037723 - 3038658 | 35133.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DCX48_14475 | Q6DAS2 | Positive | 3038763 - 3041027 | 84554.6 |
| hamp domain-containing protein | DCX48_14480 | P21823 | Positive | 3041574 - 3043202 | 58249.2 |
| hamp domain-containing protein | DCX48_14485 | P21822 | Positive | 3043890 - 3045551 | 59639.5 |
| dienelactone hydrolase family protein | DCX48_14490 | P56262 | Negative | 3045639 - 3046466 | 30349.9 |
| uridine phosphorylase | DCX48_14495 | P0A1F7 | Positive | 3046801 - 3047571 | 27223.8 |
| tyrosine-protein phosphatase | DCX48_14500 | P40289 | Positive | 3047721 - 3048503 | 29003.5 |
| phosphoenolpyruvate carboxylase | DCX48_14505 | Q6DAR6 | Negative | 3048593 - 3051232 | 98501.4 |
| pts sugar transporter | DCX48_14510 | P40739 | Negative | 3051747 - 3053120 | 49047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
