Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divergent polysaccharide deacetylase family protein | DCX48_14415 | P37691 | Negative | 3028012 - 3028959 | 35166.8 |
| murein hydrolase activator envc | DCX48_14420 | P37690 | Negative | 3028962 - 3030263 | 48277.3 |
| rhodanese-like domain-containing protein | DCX48_14425 | P0AG29 | Positive | 3030509 - 3030940 | 15772.3 |
| protein-export chaperone secb | DCX48_14430 | C6DIA3 | Positive | 3031163 - 3031633 | 17247.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DCX48_14435 | Q6DAT0 | Positive | 3031633 - 3032652 | 35997.4 |
| serine o-acetyltransferase | DCX48_14440 | P0A9D6 | Positive | 3032918 - 3033739 | 29231.3 |
| phospholipid:lipid a palmitoyltransferase | DCX48_14445 | Q6DAS8 | Positive | 3034048 - 3034701 | 24914.2 |
| hcp family type vi secretion system effector | DCX48_14450 | P46855 | Positive | 3035137 - 3035616 | 17991.2 |
| hypothetical protein | DCX48_14455 | Not Available | Positive | 3035633 - 3036349 | 27770.6 |
| duf2645 family protein | DCX48_14460 | Q46867 | Positive | 3036350 - 3036682 | 12389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
