Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_14165 | Not Available | Negative | 2984051 - 2984371 | 12181.3 |
| hypothetical protein | DCX48_14170 | Not Available | Positive | 2984546 - 2985097 | 20815.1 |
| hypothetical protein | DCX48_14175 | Not Available | Negative | 2985149 - 2985706 | 21384.5 |
| type ii toxin-antitoxin system vapc family toxin | DCX48_14180 | Not Available | Negative | 2985739 - 2986176 | 16141.2 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | DCX48_14185 | Not Available | Negative | 2986179 - 2986418 | 8884.75 |
| transcriptional regulator | DCX48_14190 | Not Available | Positive | 2986718 - 2987023 | 11384.2 |
| type ii toxin-antitoxin system hipa family toxin | DCX48_14195 | P55564 | Positive | 2987020 - 2988270 | 47142.6 |
| hypothetical protein | DCX48_14200 | Not Available | Negative | 2988413 - 2988715 | 10781.9 |
| hcp family type vi secretion system effector | DCX48_14205 | P46855 | Positive | 2989205 - 2989684 | 18214.6 |
| hypothetical protein | DCX48_14210 | Not Available | Negative | 2989702 - 2989899 | 7503.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
