Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | DCX48_14065 | Q9MAH3 | Negative | 2963965 - 2964540 | 21194.6 |
| argininosuccinate synthase | DCX48_14070 | Q6DAZ8 | Positive | 2965140 - 2966486 | 50043.3 |
| acyl-homoserine-lactone synthase | DCX48_14075 | P33882 | Positive | 2966744 - 2967394 | 25356.3 |
| luxr family transcriptional regulator | DCX48_14080 | Q47189 | Negative | 2967375 - 2968112 | 28542.4 |
| putative acyl-coa thioester hydrolase | DCX48_14085 | P55743 | Negative | 2968487 - 2969683 | 44361.6 |
| glpm family protein | DCX48_14090 | P0ACX1 | Negative | 2969712 - 2970053 | 12661.0 |
| ketoacyl-acp synthase iii | DCX48_14095 | A1TLD7 | Positive | 2970252 - 2971268 | 36113.7 |
| nad(p)-dependent oxidoreductase | DCX48_14100 | P75821 | Positive | 2971265 - 2972293 | 37854.3 |
| mbl fold metallo-hydrolase | DCX48_14105 | P9WLD6 | Positive | 2972286 - 2973092 | 29951.0 |
| cof synthetase | DCX48_14110 | P18204 | Positive | 2973089 - 2974375 | 48707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
