Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | DCX48_13965 | Q6DB17 | Positive | 2937320 - 2939389 | 76248.4 |
| hypothetical protein | DCX48_13970 | P0DW03 | Negative | 2939441 - 2940316 | 34054.2 |
| ompa family protein | DCX48_13975 | P0DW02 | Negative | 2940316 - 2941050 | 28266.0 |
| hypothetical protein | DCX48_13980 | P0DW01 | Negative | 2941054 - 2942433 | 51262.9 |
| duf3053 domain-containing protein | DCX48_13985 | P0ADK2 | Positive | 2942846 - 2943550 | 25828.9 |
| pts mannitol transporter subunit iicba | DCX48_13990 | P00550 | Positive | 2943976 - 2945886 | 67321.6 |
| mannitol-1-phosphate 5-dehydrogenase | DCX48_13995 | Q6DB14 | Positive | 2945948 - 2947096 | 41509.8 |
| mltr family transcriptional regulator | DCX48_14000 | P0AF11 | Positive | 2947247 - 2947774 | 19444.7 |
| yibl family ribosome-associated protein | DCX48_14005 | P0ADL0 | Positive | 2947933 - 2948295 | 13505.6 |
| hamp domain-containing protein | DCX48_14010 | P21822 | Negative | 2948405 - 2950297 | 68384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
