Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DCX48_13915 | P94312 | Negative | 2925749 - 2926609 | 30853.1 |
| abc transporter permease | DCX48_13920 | Q57RB0 | Negative | 2926606 - 2927550 | 33701.1 |
| tigr04028 family abc transporter substrate-binding protein | DCX48_13925 | Q32IB6 | Negative | 2927577 - 2929214 | 59395.5 |
| class a beta-lactamase-related serine hydrolase | DCX48_13930 | O05465 | Positive | 2929536 - 2930738 | 44652.8 |
| glyoxylate/hydroxypyruvate reductase ghrb | DCX48_13935 | Q6DB24 | Negative | 2930830 - 2931792 | 34507.8 |
| hamp domain-containing protein | DCX48_13940 | Q88D09 | Positive | 2932146 - 2934107 | 70709.4 |
| n-acetyltransferase | DCX48_13945 | P37664 | Negative | 2934163 - 2934606 | 17238.7 |
| dna-3-methyladenine glycosylase i | DCX48_13950 | P05100 | Negative | 2934603 - 2935166 | 21461.5 |
| sulfite exporter taue/safe family protein | DCX48_13955 | P44070 | Positive | 2935463 - 2936269 | 27747.9 |
| glycine--trna ligase subunit alpha | DCX48_13960 | Q6DB18 | Positive | 2936396 - 2937310 | 34834.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
