Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DCX48_13865 | Q60228 | Negative | 2916968 - 2917255 | 11056.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DCX48_13870 | Q47156 | Negative | 2917252 - 2917503 | 9117.98 |
| siderophore-interacting protein | DCX48_13875 | A0R6H8 | Positive | 2917759 - 2918664 | 33741.8 |
| thiol:disulfide interchange protein dsbg | DCX48_13880 | P58320 | Negative | 2918699 - 2919454 | 27737.3 |
| lyse family translocator | DCX48_13885 | O05406 | Positive | 2919675 - 2920298 | 22739.5 |
| lysr family transcriptional regulator | DCX48_13890 | Q765S2 | Negative | 2920345 - 2921217 | 32668.4 |
| phenolic acid decarboxylase | DCX48_13895 | Q9KPX2 | Positive | 2921320 - 2921829 | 19406.8 |
| alkylhydroperoxidase domain protein | DCX48_13900 | P76035 | Negative | 2921886 - 2923022 | 41891.3 |
| putative fmn-dependent luciferase-like monooxygenase | DCX48_13905 | Q53218 | Negative | 2923019 - 2924053 | 37004.1 |
| abc transporter atp-binding protein | DCX48_13910 | Q8X6W1 | Negative | 2924055 - 2925752 | 62022.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
