Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | DCX48_13815 | O34313 | Negative | 2903535 - 2905430 | 69925.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | DCX48_13820 | Q6DB47 | Negative | 2905582 - 2906328 | 27008.9 |
| oligopeptidase a | DCX48_13825 | P27237 | Negative | 2906325 - 2908349 | 76067.7 |
| tonb-dependent receptor | DCX48_13830 | P44523 | Positive | 2908670 - 2911219 | 92663.4 |
| sigma-70 family rna polymerase sigma factor | DCX48_13835 | P23484 | Positive | 2911400 - 2911912 | 19665.8 |
| duf4880 domain-containing protein | DCX48_13840 | P23485 | Positive | 2911909 - 2912898 | 36811.4 |
| energy transducer tonb | DCX48_13845 | Q05613 | Positive | 2913100 - 2913921 | 29090.0 |
| duf2623 domain-containing protein | DCX48_13850 | P64576 | Negative | 2913932 - 2914225 | 11173.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | DCX48_13855 | P37634 | Positive | 2914541 - 2915383 | 32117.9 |
| glutathione-disulfide reductase | DCX48_13860 | P06715 | Positive | 2915512 - 2916864 | 48722.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
