Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | DCX48_13715 | Q6DB68 | Positive | 2877771 - 2878208 | 15961.0 |
| gnat family n-acetyltransferase | DCX48_13720 | P0ADQ4 | Positive | 2878331 - 2879272 | 34716.6 |
| asma family protein | DCX48_13725 | P31433 | Negative | 2879582 - 2881273 | 62276.7 |
| uracil-xanthine permease | DCX48_13730 | P0AGN1 | Negative | 2881431 - 2882819 | 48825.1 |
| atp-dependent dna helicase recg | DCX48_13735 | P24230 | Negative | 2883109 - 2885190 | 76785.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | DCX48_13740 | P0AGJ3 | Negative | 2885190 - 2885882 | 25705.0 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | DCX48_13745 | P0AG25 | Negative | 2885888 - 2887987 | 79108.1 |
| dna-directed rna polymerase subunit omega | DCX48_13750 | Q6DB61 | Negative | 2888006 - 2888281 | 10255.2 |
| guanylate kinase | DCX48_13755 | Q6DB60 | Negative | 2888335 - 2888958 | 23512.1 |
| nad-dependent dna ligase ligb | DCX48_13760 | Q6DB58 | Positive | 2889402 - 2891093 | 63891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
