Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | DCX48_13665 | P00582 | Positive | 2863774 - 2866563 | 103045.0 |
| yiha family ribosome biogenesis gtp-binding protein | DCX48_13670 | Q6DB76 | Negative | 2866982 - 2867620 | 23948.1 |
| hypothetical protein | DCX48_13675 | Not Available | Positive | 2867619 - 2867810 | 6898.59 |
| der gtpase-activating protein yihi | DCX48_13680 | Q6DB75 | Positive | 2867821 - 2868375 | 20747.5 |
| oxygen-independent coproporphyrinogen iii oxidase | DCX48_13685 | P32131 | Positive | 2868697 - 2870070 | 52276.4 |
| nitrogen regulation protein nr(i) | DCX48_13690 | P41789 | Negative | 2870520 - 2871932 | 52458.1 |
| nitrogen regulation protein nr(ii) | DCX48_13695 | P06218 | Negative | 2871941 - 2872990 | 38352.9 |
| glutamate--ammonia ligase | DCX48_13700 | P0A1P7 | Negative | 2873331 - 2874740 | 51753.5 |
| translational gtpase typa | DCX48_13705 | H9L427 | Positive | 2875110 - 2876933 | 67226.4 |
| glucose-1-phosphatase | DCX48_13710 | P0A8Y3 | Positive | 2877095 - 2877706 | 22824.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
