Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | DCX48_13615 | P0AGI3 | Positive | 2854341 - 2855309 | 33387.8 |
| ribose abc transporter substrate-binding protein rbsb | DCX48_13620 | P0A2C6 | Positive | 2855335 - 2856222 | 30724.2 |
| ribokinase | DCX48_13625 | P0A9J7 | Positive | 2856418 - 2857344 | 32625.7 |
| transcriptional regulator rbsr | DCX48_13630 | P0ACQ2 | Positive | 2857357 - 2858343 | 36649.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2859869 - 2859984 | Not Available |
| molybdopterin-guanine dinucleotide biosynthesis protein b | DCX48_13640 | P32125 | Negative | 2860111 - 2860632 | 19234.2 |
| molybdenum cofactor guanylyltransferase moba | DCX48_13645 | A8GLJ4 | Negative | 2860646 - 2861200 | 20281.5 |
| duf1040 family protein | DCX48_13650 | P0ADQ1 | Positive | 2861414 - 2861683 | 10418.5 |
| serine/threonine protein kinase | DCX48_13655 | Q8X8H9 | Positive | 2861762 - 2862748 | 38715.1 |
| thiol:disulfide interchange protein dsba | DCX48_13660 | Q9RB10 | Positive | 2862773 - 2863396 | 23014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
