Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator asnc | DCX48_13565 | P0ACI8 | Negative | 2842445 - 2842906 | 17230.1 |
| aspartate--ammonia ligase | DCX48_13570 | Q6DB95 | Positive | 2843059 - 2844051 | 36953.3 |
| atpase rava stimulator viaa | DCX48_13575 | Q6DB94 | Negative | 2844048 - 2845526 | 56658.3 |
| atpase rava | DCX48_13580 | Q6DB93 | Negative | 2845532 - 2847031 | 57517.1 |
| low affinity potassium transporter kup | DCX48_13585 | Q6DB92 | Positive | 2847509 - 2849377 | 69126.3 |
| two-component system sensor histidine kinase qsec | DCX48_13590 | Q8Z3P2 | Negative | 2849548 - 2850897 | 50921.5 |
| response regulator | DCX48_13595 | P66796 | Negative | 2850894 - 2851556 | 24298.4 |
| ygiw/ydei family stress tolerance ob fold protein | DCX48_13600 | P0ADU6 | Positive | 2851801 - 2852196 | 14383.9 |
| d-ribose pyranase | DCX48_13605 | Q6DB88 | Positive | 2852401 - 2852820 | 15062.1 |
| ribose abc transporter atp-binding protein rbsa | DCX48_13610 | Q6DB87 | Positive | 2852828 - 2854333 | 54997.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
