Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | DCX48_13515 | Q6CYJ3 | Negative | 2834173 - 2835714 | 55294.2 |
| f0f1 atp synthase subunit delta | DCX48_13520 | Q6CYJ2 | Negative | 2835727 - 2836260 | 19379.6 |
| f0f1 atp synthase subunit b | DCX48_13525 | Q6CYJ1 | Negative | 2836275 - 2836745 | 17298.9 |
| f0f1 atp synthase subunit c | DCX48_13530 | Q6CYJ0 | Negative | 2836809 - 2837048 | 8211.64 |
| f0f1 atp synthase subunit a | DCX48_13535 | Q6CYI9 | Negative | 2837098 - 2837898 | 29683.4 |
| f0f1 atp synthase subunit i | DCX48_13540 | P0ABC1 | Negative | 2837920 - 2838303 | 13595.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DCX48_13545 | Q6CYI7 | Negative | 2838927 - 2839547 | 23236.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DCX48_13550 | Q6CYI6 | Negative | 2839631 - 2841520 | 69996.9 |
| hypothetical protein | DCX48_13555 | Not Available | Positive | 2841519 - 2841713 | 7105.99 |
| fmn-binding protein mioc | DCX48_13560 | P03817 | Negative | 2841912 - 2842355 | 16063.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
