Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DCX48_13465 | Not Available | Negative | 2822266 - 2822532 | 9663.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DCX48_13470 | Q9ZJN8 | Negative | 2822552 - 2823340 | 29743.4 |
| beta-ketoacyl synthase | DCX48_13475 | Not Available | Negative | 2823333 - 2824061 | 26439.6 |
| hypothetical protein | DCX48_13480 | Not Available | Negative | 2824419 - 2824811 | 14287.4 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DCX48_13485 | Q6CYJ9 | Negative | 2825083 - 2826915 | 67003.6 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DCX48_13490 | Q6CYJ8 | Negative | 2827101 - 2828471 | 48911.8 |
| right-handed parallel beta-helix repeat-containing protein | DCX48_13495 | P22751 | Positive | 2828797 - 2831031 | 80247.1 |
| f0f1 atp synthase subunit epsilon | DCX48_13500 | Q6CYJ6 | Negative | 2831388 - 2831807 | 15274.5 |
| f0f1 atp synthase subunit beta | DCX48_13505 | Q6CYJ5 | Negative | 2831827 - 2833209 | 50188.4 |
| f0f1 atp synthase subunit gamma | DCX48_13510 | Q6CYJ4 | Negative | 2833257 - 2834120 | 31390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
