Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DCX48_01440 | P0A957 | Positive | 186881 - 187522 | 22259.2 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DCX48_01445 | Q6D4B6 | Negative | 187711 - 188889 | 42437.0 |
| oligopeptidase b | DCX48_01450 | P24555 | Positive | 189090 - 191141 | 78876.2 |
| dna polymerase iii subunit theta | DCX48_01455 | P0ABT0 | Negative | 191496 - 191726 | 9129.99 |
| non-heme ferritin | DCX48_01460 | P0A9A0 | Positive | 192099 - 192605 | 19095.7 |
| duf2511 domain-containing protein | DCX48_01465 | P64506 | Positive | 192887 - 193243 | 13272.1 |
| rna chaperone/antiterminator cspa | DCX48_01470 | P0A363 | Positive | 193774 - 193986 | 7554.89 |
| excalibur calcium-binding domain-containing protein | DCX48_01475 | Not Available | Negative | 194205 - 194513 | 11900.0 |
| hypothetical protein | DCX48_01480 | Not Available | Negative | 194937 - 195419 | 17551.0 |
| duf1471 domain-containing protein | DCX48_01485 | P0AB42 | Negative | 195675 - 195902 | 7848.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
