Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DCX48_13415 | O34340 | Negative | 2812924 - 2814081 | 40571.0 |
| duf3261 domain-containing protein | DCX48_13420 | Not Available | Negative | 2814083 - 2814658 | 21211.9 |
| hypothetical protein | DCX48_13425 | Not Available | Negative | 2814655 - 2816976 | 83816.7 |
| outer membrane lipoprotein carrier protein lola | DCX48_13430 | Not Available | Negative | 2816948 - 2817553 | 22955.9 |
| acyl-coa thioesterase | DCX48_13435 | Q45061 | Negative | 2817550 - 2817972 | 16292.4 |
| glycosyltransferase family 2 protein | DCX48_13440 | C5CBV8 | Negative | 2817972 - 2819687 | 64128.7 |
| hydroxymyristoyl-acp dehydratase | DCX48_13445 | Q39T45 | Negative | 2819678 - 2820067 | 14638.7 |
| acyl-coa synthetase | DCX48_13450 | P0DUV3 | Negative | 2820054 - 2821409 | 51215.3 |
| dna gyrase subunit b | DCX48_13455 | Not Available | Negative | 2821406 - 2821984 | 22159.9 |
| acyl carrier protein | DCX48_13460 | Q8XSU8 | Negative | 2821997 - 2822245 | 9431.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
