Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase fes-binding subunit | DCX48_13265 | P37127 | Positive | 2783599 - 2785623 | 73582.2 |
| 4fe-4s dicluster domain-containing protein | DCX48_13270 | P0AAK6 | Positive | 2785620 - 2786141 | 18570.3 |
| hypothetical protein | DCX48_13275 | P0ADM9 | Positive | 2786331 - 2787074 | 27811.6 |
| ncs2 family permease | DCX48_13280 | P31466 | Negative | 2787129 - 2788466 | 46613.6 |
| 6-phosphogluconate phosphatase | DCX48_13285 | P31467 | Positive | 2789039 - 2789704 | 25030.2 |
| amino acid abc transporter permease | DCX48_13290 | P0AFT3 | Negative | 2789784 - 2790512 | 26618.4 |
| amino acid abc transporter permease | DCX48_13295 | P0AER4 | Negative | 2790514 - 2791257 | 27422.7 |
| transporter substrate-binding domain-containing protein | DCX48_13300 | P0AEN0 | Negative | 2791559 - 2792395 | 30235.2 |
| benzoate transporter bene | DCX48_13305 | P76103 | Negative | 2792523 - 2793707 | 40998.2 |
| xre family transcriptional regulator | DCX48_13310 | P77626 | Positive | 2793801 - 2794358 | 20397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
