Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | DCX48_13215 | Not Available | Negative | 2770771 - 2771193 | 16409.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | DCX48_13220 | P75905 | Negative | 2771197 - 2772525 | 51043.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | DCX48_13225 | P75906 | Negative | 2772522 - 2774537 | 76784.2 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | DCX48_13230 | P69435 | Negative | 2774549 - 2777011 | 93574.2 |
| wyl domain-containing protein | DCX48_13235 | Not Available | Positive | 2777215 - 2778099 | 33578.0 |
| ggdef domain-containing protein | DCX48_13240 | Q73RG3 | Positive | 2778295 - 2779752 | 55879.9 |
| mfs transporter | DCX48_13245 | D0ZXQ3 | Positive | 2779855 - 2781357 | 52612.5 |
| hypothetical protein | DCX48_13250 | Q7DDE8 | Negative | 2781465 - 2782124 | 23331.8 |
| duf4810 domain-containing protein | DCX48_13255 | Not Available | Negative | 2782121 - 2782480 | 13177.8 |
| hypothetical protein | DCX48_13260 | Q7DDH4 | Negative | 2782499 - 2783170 | 24027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
